STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26705.1Putative transcriptional regulator, TetR family. (235 aa)    
Predicted Functional Partners:
ACP26704.1
Putative exported endoribonuclease family protein.
 
    0.739
ACP24503.1
Hypothetical protein.
  
     0.631
ACP24516.1
Hypothetical protein.
  
     0.577
ACP24541.1
Hypothetical protein.
  
   
 0.564
ACP25766.1
Putative adenylate cyclase.
  
   
 0.544
ACP24009.1
Beta-ketoacyl synthase.
 
   
 0.513
ACP23806.1
Hypothetical protein, DGPFAETKE family.
  
     0.502
ACP25619.1
Hypothetical protein.
  
     0.478
ACP24399.1
long-chain-fatty-acid--CoA ligase.
     
 0.464
ACP25725.1
Putative oxidoreductase.
  
     0.449
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.