Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
phaFMultiple resistance and pH regulation protein F. (93 aa)    
Predicted Functional Partners:
ACP26711.1
Monovalent cation/proton antiporter.
 
 
 0.997
ACP26712.1
NADH-ubiquinone oxidoreductase, chain 4L.
 
 
 0.996
phaE
pH adaption potassium efflux system protein.
 
 
 0.996
phaG
pH adaptation potassium efflux system protein G.
 
 
 0.996
ACP26713.1
Multiple resistance/pH regulation related protein D; Na+/H+ antiporter.
 
 
 0.991
ACP24543.1
Na+/H+ antiporter.
 
 
 0.981
ACP24545.1
Putative monovalent cation/H+ antiporter.
 
 
 0.976
ACP24547.1
Putative monovalent cation/H+ antiporter.
 
 
 0.971
ACP24549.1
Putative monovalent cation/H+ antiporter.
 
 
 0.947
ACP24544.1
Putative monovalent cation/H+ antiporter.
 
 
 0.928
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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