STRINGSTRING
bkdB protein (Sinorhizobium fredii NGR234) - STRING interaction network
"bkdB" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdBannotation not available (426 aa)    
Predicted Functional Partners:
bkdA2
annotation not available (337 aa)
  0.999
bkdA1
annotation not available (410 aa)
 
  0.999
lpdA2
annotation not available (464 aa)
  0.998
NGR_c12880
annotation not available (481 aa)
  0.984
lpdA1
annotation not available (468 aa)
  0.984
NGR_c21590
annotation not available (475 aa)
   
  0.937
NGR_c03390
Methylmalonate-semialdehyde dehydrogenase; Similar to DddC (498 aa)
     
 
  0.908
NGR_c33370
annotation not available (635 aa)
   
 
  0.907
ascA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family (649 aa)
   
 
  0.907
NGR_c26750
annotation not available (549 aa)
   
 
  0.907
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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