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NGR_c30010 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c30010" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c30010annotation not available (372 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate (453 aa)
 
 
  0.997
NGR_c36470
annotation not available (389 aa)
   
 
  0.939
aatA2
annotation not available (429 aa)
     
 
  0.918
attA1
annotation not available (410 aa)
     
 
  0.918
aatA3
annotation not available (400 aa)
     
 
  0.918
NGR_c30170
annotation not available (416 aa)
   
 
    0.913
NGR_c13000
annotation not available (287 aa)
     
 
    0.903
NGR_c29630
annotation not available (411 aa)
     
 
    0.901
NGR_c03590
annotation not available (417 aa)
     
 
    0.901
NGR_a01610
Uncharacterized oxidoreductase y4sL; Either a functional dehydrogenase or a non-functional fragment (203 aa)
     
 
    0.901
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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