STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26748.1Type I secretion system ATPase. (667 aa)    
Predicted Functional Partners:
ACP26749.1
Putative Type I secretion system ATPase, PrtD.
 
     0.936
ACP26750.1
Putative secretion protein Type I; HlyD family.
 
     0.903
ACP26746.1
Hypothetical protein.
 
     0.790
ACP26751.1
TPR repeat-containing protein; Similar to cellulose biosynthesis protein.
 
     0.579
ACP26747.1
Hypothetical protein DQS/QE repeat protein.
       0.576
ACP25692.1
Hypothetical protein.
  
     0.470
bioN
Putative biotin transporter, permease protein BioN.
  
     0.411
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.