Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACP26763.1Putative amino acid ABC transporter, permease protein. (221 aa)    
Predicted Functional Partners:
ACP26765.1
ABC transport system, ATP-binding protein.
 
 
 0.976
ACP25482.1
Putative solute-binding component of ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 
 0.969
ACP27013.1
Putative extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.945
aapP
Putative ATP-binding component of a transport system.
 
 
 0.902
ACP27015.1
Amino acid ABC transporter, ATP-binding protein.
 
 
 0.897
ACP26766.1
ABC transporter substrate-binding protein.
 
 
 0.873
ACP26764.1
Putative permease component of ABC transporter protein.
 
  
 
0.857
ACP23995.1
Putative ABC transporter, periplasmic amino acid-binding protein.
 
 0.816
ACP23960.1
Predicted extracellular amino acid solute-binding protein.
 
 
 0.805
ACP23996.1
Amino acid ABC transporter, ATP-binding protein.
 
    0.775
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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