Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP26809.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
ACP26810.1
Putative sensor histidine protein kinase.
     0.991
ACP26141.1
Activator of Hsp90 ATPase 1 family protein.
 
     0.725
ACP26140.1
Hypothetical protein.
 
     0.598
ACP26812.1
Hypothetical protein.
 
     0.541
ACP26142.1
Putative transcriptional regulator, ArsR family.
 
     0.527
ACP24247.1
Glutatione S-transferase.
  
     0.515
ACP26811.1
Putative sensor histidine protein kinase.
       0.429
ACP24630.1
Putative transcription regulator protein.
  
     0.418
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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