STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP26858.1Putative oxidoreductase (YgfF), NAD(P)-binding domain protein. (250 aa)    
Predicted Functional Partners:
ACP26859.1
Conserved hypothetical protein.
       0.778
ACP26860.1
Lysine exporter protein; LYSE/YGGA.
       0.773
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 
 0.705
lpdA1
Dihydrolipoamide dehydrogenase.
  
   0.674
ACP26779.1
Putative short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.673
ACP25353.1
Putative short chain dehydrogenase/reductase family member; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.550
ACP26281.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.549
ACP24416.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.544
sucB2
Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
  
 
 0.528
betC
Choline-sulfatase.
   
 
 0.504
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.