STRINGSTRING
NGR_c31880 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c31880" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c31880annotation not available (317 aa)    
Predicted Functional Partners:
NGR_c31870
annotation not available (475 aa)
 
   
  0.915
dnaE1
Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase (1117 aa)
 
   
  0.853
NGR_c36330
annotation not available (209 aa)
   
          0.596
NGR_c31890
annotation not available (144 aa)
              0.561
NGR_c24530
annotation not available (90 aa)
   
          0.559
NGR_c26950
annotation not available (64 aa)
   
          0.515
NGR_c08020
annotation not available (318 aa)
   
          0.478
NGR_c31240
annotation not available (167 aa)
   
          0.455
NGR_c16800
annotation not available (92 aa)
   
          0.454
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair (254 aa)
   
   
  0.449
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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