STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndvAGlucan exporter ATP-binding protein; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (585 aa)    
Predicted Functional Partners:
ACP24009.1
Beta-ketoacyl synthase.
  
 0.741
ACP24662.1
Hypothetical ABC transporter ATP-binding protein.
  
 
0.723
ACP26228.1
ABC sorbitol/mannitol transporter, ATPase subunit.
 
     
0.692
ACP25505.1
Putative ATP-binding component of ABC transporter.
 
0.639
ndvB
Protein NdvB.
 
 
 0.581
ACP25372.1
DNA polymerase III, delta prime subunit.
 
  
 0.576
ACP26118.1
Hypothetical protein.
   
 0.568
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 0.567
ACP27019.1
Putative lysine exporter protein.
       0.566
dnaK2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.560
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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