Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP27041.1Putative dehydrogenase transmembrane protein. (506 aa)    
Predicted Functional Partners:
cycG
Diheme cytochrome c-type.
 
 
 0.876
ACP27042.1
3-oxoacyl-(acyl-carrier protein) reductase.
 
     0.848
ACP27031.1
Oxidoreductase domain protein.
 
    0.685
ACP26608.1
Hypothetical protein.
    
 0.658
ACP27044.1
Hypothetical protein associated with stress responsive alpha-beta barrel.
 
     0.584
ACP25433.1
Kinesin-like protein.
    
  0.555
ACP26666.1
WD-40 repeat protein.
    
  0.555
ACP27043.1
Glucose-methanol-choline oxidoreductase.
 
   
 0.535
ACP26579.1
TPR repeat-containing protein.
  
 
  0.532
ACP25758.1
Hypothetical protein.
  
 
  0.514
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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