STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27043.1Glucose-methanol-choline oxidoreductase. (551 aa)    
Predicted Functional Partners:
ACP26608.1
Hypothetical protein.
    
 0.818
ACP27044.1
Hypothetical protein associated with stress responsive alpha-beta barrel.
 
     0.788
ACP25433.1
Kinesin-like protein.
    
 0.691
ACP26666.1
WD-40 repeat protein.
    
 0.691
fixP2
Cytochrome-c oxidase FixP2; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.555
ACP27041.1
Putative dehydrogenase transmembrane protein.
 
   
 0.529
cycG
Diheme cytochrome c-type.
  
 
 0.511
ttuD2
Hydroxypyruvate reductase.
       0.510
norC
Nitric-oxide reductase subunit C.
  
 
 0.503
fixP1
FixP3 cytochrome c oxidase membrane anchored subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.503
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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