STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27049.1Phosphatidic acid phosphatase type 2. (232 aa)    
Predicted Functional Partners:
ACP24399.1
long-chain-fatty-acid--CoA ligase.
  
 0.880
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
 0.853
ACP26000.1
Hypothetical protein.
    
 0.817
ACP24820.1
Cytochrome P450 hydroxylase.
   
 0.808
ACP27139.1
Cytochrome P450 family protein.
   
 0.808
fadD
long-chain-fatty-acid-CoA-ligase.
    
 0.705
ACP24299.1
Putative long-chain-fatty-acid--CoA ligase protein.
    
 0.705
ACP24700.1
Putative long-chain-fatty-acid--CoA ligase.
    
 0.705
ACP24802.1
Putative transmembrane succinoglycan biosynthesis transport protein.
 
  
 0.554
ACP24009.1
Beta-ketoacyl synthase.
  
 
 0.520
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.