STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27064.1Conserved hypothetical protein. (233 aa)    
Predicted Functional Partners:
rpmI
50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
 
    0.767
ACP26585.1
UPF0335 protein; Belongs to the UPF0335 family.
  
   
 0.766
ACP27087.1
Putative import inner membrane translocase, subunit Tim44.
  
     0.762
ACP25822.1
Hypothetical protein.
  
   
 0.761
ACP27113.1
DNA helicase (double-strand break repair), AddA type; Belongs to the helicase family. UvrD subfamily.
  
     0.720
ACP27114.1
Double-strand break repair protein AddB.
  
     0.719
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.708
ACP26882.1
Putative outer membrane lipoproteins carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.673
HolA
DNA polymerase III, delta subunit protein.
  
     0.649
atpF2
FoF1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.616
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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