STRINGSTRING
NGR_c33600 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c33600" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c33600annotation not available (125 aa)    
Predicted Functional Partners:
NGR_c33570
annotation not available (233 aa)
 
          0.890
NGR_c33590
annotation not available (205 aa)
              0.885
mltA
annotation not available (368 aa)
              0.883
NGR_c33560
annotation not available (169 aa)
              0.666
NGR_c34760
annotation not available (114 aa)
   
 
      0.649
NGR_c13060
annotation not available (105 aa)
   
          0.637
NGR_c07780
annotation not available (138 aa)
   
          0.560
spsB
Putative kinase Y4dM; y4dM; NGR234_66; Belongs to the HipA Ser/Thr kinase family (409 aa)
     
 
  0.559
spsD
Putative kinase Y4mE; y4mE; NGR234_236; Belongs to the HipA Ser/Thr kinase family (420 aa)
     
 
  0.559
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (811 aa)
         
  0.543
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (15%) [HD]