STRINGSTRING
NGR_c34100 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c34100" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c34100annotation not available (698 aa)    
Predicted Functional Partners:
NGR_c24770
annotation not available (437 aa)
         
  0.917
NGR_c03850
annotation not available (457 aa)
     
 
    0.903
amaB
annotation not available (416 aa)
         
    0.900
NGR_c34410
annotation not available (558 aa)
 
 
  0.799
NGR_c18490
annotation not available (691 aa)
 
          0.796
NGR_c18440
annotation not available (100 aa)
   
          0.726
NGR_c18370
annotation not available (524 aa)
   
          0.719
NGR_c18360
annotation not available (234 aa)
   
          0.712
NGR_c18400
annotation not available (206 aa)
   
          0.701
mttB
annotation not available (514 aa)
   
          0.691
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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