STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27140.1Hydantoinase/oxoprolinase family protein. (698 aa)    
Predicted Functional Partners:
ACP27165.1
Putative hydantoinase B/oxoprolinase family protein.
 
 0.928
mttB
Trimethylamine methyltransferase MttB; Belongs to the trimethylamine methyltransferase family.
  
     0.753
ACP25921.1
Putative acyl-CoA synthetase protein.
  
     0.691
ACP25943.1
Dimethylglycine dehydrogenase precursor; Belongs to the GcvT family.
 
  
 0.606
ACP26120.1
Hypothetical protein.
  
     0.593
ACP25923.1
Putative substrate-binding component of ABC transporter protein.
  
     0.568
ACP26102.1
Conserved hypothetical protein.
  
     0.560
ACP26117.1
Hypothetical protein.
  
     0.556
ACP26118.1
Hypothetical protein.
 
     0.551
amaB
N-carbamoyl-beta-alanine amidohydrolase protein.
    
 0.541
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.