STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27149.1Conserved hypothetical protein contains extracellular solute-binding domain. (408 aa)    
Predicted Functional Partners:
ACP27148.1
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.961
ACP27147.1
Putative ABC transporter, ATP-binding protein.
 
   
 0.958
ACP23957.1
Predicted CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.801
ACP27146.1
Putative ATP-dependent helicase protein.
       0.791
ACP23890.1
Hypothetical protein contains SNARE associated Golgi protein region.
 
  
 0.705
ACP27145.1
Two-component sensor histidine kinase protein.
       0.654
ACP27144.1
Signal transduction response regulator, receiver region.
       0.495
ACP27150.1
Ornithine cyclodeaminase/mu-crystallin family protein.
       0.494
ACP23891.1
Predicted mercuric reductase.
 
     0.446
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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