STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27250.1Oxidoreductase, Gfo/Idh/MocA family. (354 aa)    
Predicted Functional Partners:
ACP27252.1
Binding-protein-dependent transport systems inner membrane component.
 
     0.933
ACP27251.1
Binding-protein-dependent transport systems inner membrane component.
 
     0.928
ACP27253.1
Extracellular solute-binding protein, family 1.
 
     0.854
ACP27256.1
Putative transcriptional regulator, GntR family.
 
    0.738
ACP27249.1
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.737
MurQ
Predicted sugar isomerase; SIS.
 
     0.636
ACP27257.1
Glucosamine--fructose-6-phosphate aminotransferase.
 
     0.607
iolB
Myo-inositol catabolism IolB domain protein.
  
  
 0.597
ACP27255.1
ATPase, BadF/BadG/BcrA/BcrD type.
 
    0.558
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
    0.546
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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