Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACP27253.1Extracellular solute-binding protein, family 1. (419 aa)    
Predicted Functional Partners:
ACP27251.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.989
ACP27252.1
Binding-protein-dependent transport systems inner membrane component.
 
 0.986
ACP26307.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
  
 0.905
ACP27039.1
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.905
ACP24463.1
Hypothetical ABC transporter ATP-binding protein.
  
 0.889
ACP25544.1
Putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
  
 0.889
ACP27250.1
Oxidoreductase, Gfo/Idh/MocA family.
 
     0.855
ACP27256.1
Putative transcriptional regulator, GntR family.
 
 
   0.851
MurQ
Predicted sugar isomerase; SIS.
 
     0.842
ACP27255.1
ATPase, BadF/BadG/BcrA/BcrD type.
 
    0.777
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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