STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27286.1ErfK/YbiS/YcfS/YnhG family protein. (224 aa)    
Predicted Functional Partners:
ACP27285.1
Putative outer membrane protein, OmpA/MotB domain protein.
       0.762
ACP24325.1
Lipoprotein, putative.
 
  
 0.513
MepA
Penicillin-insensitive murein endopeptidase.
  
     0.466
ACP27287.1
Putative transmembrane transport protein.
  
    0.451
ACP25902.1
Putative ErfK/YbiS/YhnG family protein.
  
     0.444
ACP24318.1
Invasion associated locus B.
  
     0.438
ACP25420.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.