STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27294.1Conserved hypothetical protein with signal transduction histidine kinase domain, HWE region. (568 aa)    
Predicted Functional Partners:
ACP26279.1
Putative two-component response regulator protein.
 
   
 0.770
ACP26223.1
Putative two-component response regulator transcriptional regulatory protein.
 
   
 0.768
ACP24151.1
Predicted two-component signal transduction response regulator, contains receiver domain.
 
   
 0.762
ACP27243.1
Putative response regulator receiver protein.
 
   
 0.744
ACP24228.1
Hypothetical protein.
 
     0.677
ACP24541.1
Hypothetical protein.
  
     0.602
ACP25481.1
OmpA family protein.
  
     0.581
ACP24737.1
Putative transmembrane protein.
  
     0.500
ACP25744.1
Hypothetical protein.
  
     0.485
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
       0.472
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.