STRINGSTRING
fabA protein (Sinorhizobium fredii NGR234) - STRING interaction network
"fabA" - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabA3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP. Can catalyze the dehydratase reaction for beta- hydroxyacyl-ACPs with saturated chain lengths up to 16-0, being most active on intermediate chain length (171 aa)    
Predicted Functional Partners:
fabB
annotation not available (406 aa)
 
 
  0.983
fabI2
annotation not available (281 aa)
   
 
  0.980
NGR_c08910
annotation not available (245 aa)
   
  0.960
fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs (154 aa)
     
 
  0.957
NGR_c22370
annotation not available (250 aa)
   
  0.937
NGR_c30920
annotation not available (256 aa)
   
  0.926
fabG2
3-ketoacyl-acyl carrier protein reductase (263 aa)
   
  0.926
NGR_a03830
Uncharacterized short-chain type dehydrogenase/reductase y4eL; y4eL; NGR234_93; Belongs to the short-chain dehydrogenases/reductases (SDR) family (248 aa)
   
  0.926
fabI3
annotation not available (272 aa)
   
 
  0.925
NGR_c18070
annotation not available (158 aa)
         
  0.906
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
Server load: low (13%) [HD]