Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACP27309.1Putative transposase for insertion sequence NGRIS-20a. (460 aa)    
Predicted Functional Partners:
ACP24721.1
Putative transposase for insertion sequence NGRIS-22c; Similar to y4rI of pNGR234a.
  
     0.714
ACP25252.1
Putative transposase for insertion sequence NGRIS-22b; Similar to y4rI of pNGR234a.
  
     0.714
ACP26842.1
Putative transposase for insertion sequence NGRIS-22a; Similar to y4rI of pNGR234a.
  
     0.714
ACP27310.1
Hypothetical protein.
       0.536
ACP23877.1
Integrase catalytic core domain protein.
 
     0.497
ACP24517.1
Integrase catalytic region.
 
     0.496
ACP26075.1
Putative transposase for insertion sequence NGRIS-10.
 
     0.496
ACP26034.1
Putative transposase for insertion sequence NGRIS-17a.
  
     0.458
ACP27325.1
Putative plasmid maintenance protein, CcdB.
  
     0.423
ACP26255.1
Putative transposase for insertion sequence NGRIS-9.
 
     0.413
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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