STRINGSTRING
NGR_c36080 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c36080" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c36080annotation not available (197 aa)    
Predicted Functional Partners:
NGR_c36090
annotation not available (175 aa)
 
          0.921
trpE
annotation not available (729 aa)
         
  0.680
NGR_c36100
annotation not available (341 aa)
              0.650
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (611 aa)
              0.601
NGR_c36070
annotation not available (413 aa)
              0.584
NGR_c14430
annotation not available (244 aa)
 
     
  0.536
NGR_c29560
annotation not available (279 aa)
 
 
 
  0.481
NGR_c32970
annotation not available (220 aa)
 
     
0.478
NGR_c24770
annotation not available (437 aa)
   
 
  0.471
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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