STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27331.1Histone deacetylase superfamily. (341 aa)    
Predicted Functional Partners:
ACP24375.1
Superfamily II DNA/RNA helicase and SNF2 family-related protein.
    
 0.858
ACP26118.1
Hypothetical protein.
   
 0.805
ACP25433.1
Kinesin-like protein.
    
 0.757
ACP26666.1
WD-40 repeat protein.
    
 0.757
ACP27351.1
Conserved hypothetical protein.
   
  0.648
ACP26608.1
Hypothetical protein.
   
 0.636
ACP27330.1
Acetyltransferase, GNAT family.
     
 0.577
ACP27329.1
Putative transcriptional regulator with cupin 2 conserved barrel.
       0.570
ACP23970.1
Hypothetical protein contains peptidoglycan binding domain.
  
 0.529
ACP26426.1
Putative CBS domain protein.
  
  
 0.510
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.