STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27344.1Putative signal transduction response regulator. (221 aa)    
Predicted Functional Partners:
ACP27345.1
Putative sensory transduction histidine kinase.
 
 
 0.963
ACP26773.1
Sensor protein.
 
 
 0.823
ACP27117.1
Sensory transduction histidine kinase.
 
 
 0.821
phoR
Two component sensor histidine kinase protein, phosphate regulon sensor PhoR.
 
 0.819
ACP27343.1
Hypothetical protein.
  
  
 0.788
ACP24578.1
Sensor protein.
 
 0.781
ACP24133.1
Predicted sensor histidine kinase protein with ATP-binding domain.
 
 
 0.768
ACP24554.1
Two component sensor kinase.
 
 0.767
ACP24570.1
Two-component sensor histidine kinase protein.
 
 
 0.763
ACP26447.1
Putative two-component response regulator transcriptional regulatory protein.
  
 
 0.758
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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