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NGR_c36710 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"NGR_c36710" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGR_c36710annotation not available (193 aa)    
Predicted Functional Partners:
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (234 aa)
   
        0.884
NGR_c18790
annotation not available (96 aa)
   
          0.591
ppdK
annotation not available (896 aa)
   
   
  0.584
NGR_c18760
annotation not available (96 aa)
   
          0.575
NGR_c36690
annotation not available (95 aa)
              0.569
NGR_c16640
annotation not available (108 aa)
              0.563
metH
annotation not available (1256 aa)
         
  0.561
NGR_c18770
annotation not available (98 aa)
   
          0.555
NGR_c18780
annotation not available (97 aa)
   
          0.528
NGR_c02030
annotation not available (69 aa)
   
          0.512
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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