Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACP27399.1Extracellular solute-binding, family 1. (432 aa)    
Predicted Functional Partners:
ACP27400.1
Binding-protein-dependent transport system inner membrane component.
 
 0.995
ugpE
Binding-protein-dependent transport system inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.993
ugpC
ABC transporter related sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.969
ACP27403.1
Hypothetical protein associated with endonuclease/exonuclease/phosphatase.
 
     0.727
ACP26305.1
Putative permease component of ABC transporter.
 
 
 0.632
ACP24461.1
Putative transmembrane component of ABC transporter.
 
 
 0.620
ACP25546.1
Putative transmembrane component of ABC transporter.
 
 
 0.600
ACP26306.1
Putative sugar ABC transporter, permease protein.
 
 
 0.546
ACP24109.1
Predicted alpha-glucoside transport system permease protein.
  
 
 0.538
ACP26230.1
Sorbitol/mannitol ABC transporter, permease protein.
  
 
 0.538
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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