STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCABC transporter related sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (379 aa)    
Predicted Functional Partners:
ugpE
Binding-protein-dependent transport system inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.988
ACP27400.1
Binding-protein-dependent transport system inner membrane component.
 
 0.979
ACP27399.1
Extracellular solute-binding, family 1.
 
 0.953
ACP26306.1
Putative sugar ABC transporter, permease protein.
 
 0.863
ACP26305.1
Putative permease component of ABC transporter.
 
 
 0.861
ACP27251.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.734
ACP27252.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.684
ACP24461.1
Putative transmembrane component of ABC transporter.
 
 
 0.683
ACP26230.1
Sorbitol/mannitol ABC transporter, permease protein.
 
 
 0.647
ACP26229.1
Putative mannitol transmembrane permease component of ABC transporter.
 
 
 0.610
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.