STRINGSTRING
gshB2 protein (Sinorhizobium fredii NGR234) - STRING interaction network
"gshB2" - annotation not available in Sinorhizobium fredii NGR234
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshB2annotation not available (315 aa)    
Predicted Functional Partners:
NGR_c03850
annotation not available (457 aa)
       
  0.962
NGR_c17000
annotation not available (463 aa)
     
  0.962
NGR_c07880
annotation not available (886 aa)
     
 
  0.919
pepD
annotation not available (500 aa)
     
 
  0.912
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (497 aa)
   
 
    0.906
NGR_c34750
annotation not available (463 aa)
   
 
    0.906
gltB1
annotation not available (1574 aa)
   
   
  0.905
kefB
annotation not available (618 aa)
         
  0.834
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (459 aa)
     
 
  0.807
gst1
Glutathione S-transferase GST-6.0; GST B1-1 (193 aa)
   
 
  0.750
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium fredii NGR234, Sinorhizobium sp. NGR234
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