STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP27405.1Mg chelatase-related protein. (510 aa)    
Predicted Functional Partners:
ACP26415.1
Putative competence protein F; COMF.
 
  
 0.836
ACP24873.1
DNA processing chain A.
 
 0.810
ACP25128.1
DNA uptake protein.
 
  
 0.719
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
 
   
 0.662
gshB2
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
       0.523
flgF
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
   
   0.512
ACP27398.1
Conserved hypothetical protein, UPF0102 family; Belongs to the UPF0102 family.
 
  
 0.451
ACP25158.1
Lipoprotein.
 
 
   0.424
Your Current Organism:
Sinorhizobium fredii NGR234
NCBI taxonomy Id: 394
Other names: Ensifer fredii NGR234, Plasmid pNGR234a, Rhizobium sp. (strain NGR234), Rhizobium sp. NGR234, S. fredii NGR234, Sinorhizobium sp. NGR234
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.