Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DB31_0085Multimodular transpeptidase-transglycosylase. (780 aa)    
Predicted Functional Partners:
DB31_0086
Hypothetical protein.
 
   
 0.929
DB31_0617
Multimodular transpeptidase-transglycosylase.
  
  
0.829
DB31_3053
Multimodular transpeptidase-transglycosylase.
  
  
0.829
DB31_1649
Cell division protein FtsI.
  
  
 0.801
DB31_4596
Cell division protein FtsI.
  
  
 0.795
DB31_3676
D-alanyl-D-alanine carboxypeptidase.
   
 
 0.764
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
0.757
DB31_8920
Cell division protein FtsI.
     
 0.700
DB31_0782
LysM domain protein.
     
  0.605
DB31_3475
N-acetylmuramoyl-L-alanine amidase.
     
  0.605
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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