Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0237Transcriptional regulator, LacI family protein. (355 aa)    
Predicted Functional Partners:
DB31_1941
Phosphoenolpyruvate-protein phosphotransferase of PTS system.
 
 
 
 0.944
DB31_5032
Glutamate synthase [NADPH] large chain.
    
 
 0.894
DB31_6893
Phosphotransferase system, phosphocarrier protein HPr.
 
 
 
 0.827
DB31_6459
Long-chain-fatty-acid--CoA ligase.
    
 
 0.811
DB31_0238
OmpA-related protein.
 
     0.798
DB31_0096
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.792
DB31_4849
Ribose ABC transport system, periplasmic ribose-binding protein RbsB.
 
 
 0.689
DB31_5534
Putative sugar ABC transport system, permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.689
DB31_6695
Ribose ABC transport system, periplasmic ribose-binding protein RbsB.
 
 
 0.689
purA-2
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
 
 0.679
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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