Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0263Secreted trypsin-like serine protease. (262 aa)    
Predicted Functional Partners:
DB31_0154
Hypothetical protein.
  
 
 
 0.728
DB31_4218
Calcium binding protein.
  
 
 
 0.693
DB31_6440
Hypothetical protein.
  
     0.667
DB31_7947
Hypothetical protein.
  
 
 0.663
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.607
DB31_2890
FG-GAP repeat domain protein.
  
     0.597
DB31_8949
Alpha-amylase.
  
 
  0.566
DB31_1313
Hypothetical protein.
  
    0.546
DB31_7708
RTX toxin.
  
     0.543
DB31_0264
Hypothetical protein.
       0.542
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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