Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0414Endonuclease/exonuclease/phosphatase. (363 aa)    
Predicted Functional Partners:
DB31_0415
Aminopeptidase.
       0.675
DB31_6663
Hypothetical protein.
  
     0.646
DB31_3397
Hypothetical protein.
  
  
  0.645
DB31_7312
Hypothetical protein.
  
  
  0.609
DB31_0413
Hypothetical protein.
 
     0.607
DB31_1485
Alpha,alpha-trehalose-phosphate synthase.
   
    0.573
DB31_6809
Membrane-anchored protein.
  
     0.569
DB31_1235
Phosphoglycolate phosphatase.
 
     0.540
DB31_0066
Hypothetical protein.
  
     0.508
DB31_7165
L-proline glycine betaine binding ABC transporter protein ProX.
   
    0.508
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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