Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0726Endo-1,4-beta-xylanase A precursor. (438 aa)    
Predicted Functional Partners:
DB31_2056
Streptogrisin-C precursor.
 
     0.891
DB31_4783
Beta-glucosidase.
 
 
 0.748
DB31_7676
Periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
 
 0.719
DB31_0229
Periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
 
 0.698
DB31_2057
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.666
DB31_4782
Putative secreted protein.
 
     0.632
DB31_4757
Beta-hexosaminidase.
 
  
 0.587
DB31_2238
Hypothetical protein; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.567
DB31_4779
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
 0.550
DB31_2613
Chitinase.
  
  
 0.549
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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