Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0772Hypothetical protein. (418 aa)    
Predicted Functional Partners:
DB31_4054
Integral membrane protein.
  
     0.698
DB31_1263
Hypothetical protein.
  
     0.683
DB31_0602
Membrane protein.
  
     0.623
DB31_8027
Fatty acid desaturase family protein.
  
     0.570
DB31_2328
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.566
DB31_9025
Fatty acid desaturase family protein.
  
     0.558
DB31_5917
Hypothetical protein.
  
     0.544
DB31_6851
Hypothetical protein.
  
   
 0.536
DB31_8217
Hypothetical protein.
  
     0.535
DB31_0771
TPR domain protein, putative component of TonB system.
       0.527
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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