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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0857Lytic transglycosylase, catalytic. (227 aa)    
Predicted Functional Partners:
DB31_0856
TolA protein.
       0.809
DB31_0855
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.797
DB31_0049
Flagellar motor switch protein FliM.
 
  
 0.789
DB31_0052
Flagellum-specific ATP synthase FliI.
 
  
 0.675
DB31_0858
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
       0.631
DB31_6308
Hypothetical protein.
 
   
 0.593
DB31_0860
Lysine decarboxylase family protein; Belongs to the LOG family.
   
   0.586
DB31_0859
Rhomboid family protein.
       0.560
DB31_4665
Chemotaxis protein CheC -- inhibitor of MCP methylation.
  
    0.500
DB31_0050
Hypothetical protein.
  
    0.451
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.