Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DB31_0570 | DB31_0883 | Hypothetical protein. | Type II/IV secretion system protein TadC. | 0.674 |
DB31_0570 | DB31_0884 | Hypothetical protein. | Flp pilus assembly protein TadB. | 0.763 |
DB31_0570 | DB31_0885 | Hypothetical protein. | Heat shock protein 22.5 (Hsp22.5). | 0.882 |
DB31_0570 | DB31_0891 | Hypothetical protein. | Hypothetical protein. | 0.618 |
DB31_0570 | DB31_2686 | Hypothetical protein. | Type II/IV secretion system secretin RcpA/CpaC. | 0.695 |
DB31_0570 | DB31_3252 | Hypothetical protein. | Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein. | 0.515 |
DB31_0570 | DB31_5864 | Hypothetical protein. | Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein. | 0.572 |
DB31_0570 | DB31_5865 | Hypothetical protein. | Type II/IV secretion system secretin; Belongs to the bacterial secretin family. | 0.806 |
DB31_0883 | DB31_0570 | Type II/IV secretion system protein TadC. | Hypothetical protein. | 0.674 |
DB31_0883 | DB31_0884 | Type II/IV secretion system protein TadC. | Flp pilus assembly protein TadB. | 0.994 |
DB31_0883 | DB31_0885 | Type II/IV secretion system protein TadC. | Heat shock protein 22.5 (Hsp22.5). | 0.979 |
DB31_0883 | DB31_0891 | Type II/IV secretion system protein TadC. | Hypothetical protein. | 0.741 |
DB31_0883 | DB31_2686 | Type II/IV secretion system protein TadC. | Type II/IV secretion system secretin RcpA/CpaC. | 0.798 |
DB31_0883 | DB31_3252 | Type II/IV secretion system protein TadC. | Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein. | 0.949 |
DB31_0883 | DB31_4884 | Type II/IV secretion system protein TadC. | Hypothetical protein. | 0.615 |
DB31_0883 | DB31_5864 | Type II/IV secretion system protein TadC. | Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily protein. | 0.939 |
DB31_0883 | DB31_5865 | Type II/IV secretion system protein TadC. | Type II/IV secretion system secretin; Belongs to the bacterial secretin family. | 0.903 |
DB31_0883 | DB31_6730 | Type II/IV secretion system protein TadC. | Hypothetical protein. | 0.615 |
DB31_0884 | DB31_0570 | Flp pilus assembly protein TadB. | Hypothetical protein. | 0.763 |
DB31_0884 | DB31_0883 | Flp pilus assembly protein TadB. | Type II/IV secretion system protein TadC. | 0.994 |
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