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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0898Putative ATPase. (323 aa)    
Predicted Functional Partners:
DB31_6145
Type IV fimbrial assembly protein PilC.
 
 
 0.897
DB31_2874
General secretion pathway protein F.
 
 
 0.888
DB31_0409
General secretion pathway protein F.
 
 
 0.872
DB31_0899
Type IV fimbrial assembly, ATPase PilB.
 
    
0.845
DB31_4460
Pilin.
 
 0.783
DB31_6155
Pilin.
 
 0.774
DB31_3630
Pilin.
 
 0.772
DB31_5960
Hypothetical protein.
  
     0.767
DB31_6320
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
     0.758
DB31_0895
Hypothetical protein.
       0.753
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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