Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DB31_0902Biopolymer transport protein ExbD/TolR. (151 aa)    
Predicted Functional Partners:
DB31_0901
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.982
DB31_0271
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.926
DB31_6952
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.926
DB31_2710
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.921
DB31_8179
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.917
DB31_3964
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.913
DB31_4229
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.797
DB31_8177
Biopolymer transport protein ExbD/TolR.
  
     0.714
bamA
Outer membrane protein assembly factor YaeT precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.687
DB31_3401
Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   0.632
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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