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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0904NG,NG-dimethylarginine dimethylaminohydrolase 1. (234 aa)    
Predicted Functional Partners:
DB31_5032
Glutamate synthase [NADPH] large chain.
   
 
  0.955
DB31_2268
Sarcosine dehydrogenase; Belongs to the GcvT family.
  
  
  0.748
DB31_0669
Glutamate synthase [NADPH] small chain.
   
 
 0.702
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine.
 
  
 0.620
DB31_0903
Hypothetical protein.
       0.613
DB31_0905
2-heptaprenyl-1,4-naphthoquinone methyltransferase.
    
  0.613
DB31_1850
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.604
DB31_7300
General stress protein.
   
    0.560
DB31_6324
Agmatinase; Belongs to the arginase family.
    
 0.559
DB31_0343
Ferredoxin reductase.
    
 0.549
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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