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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_0992Glycolate dehydrogenase. (462 aa)    
Predicted Functional Partners:
DB31_7006
Malate synthase; Belongs to the malate synthase family.
  
 
 0.960
DB31_2861
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.959
DB31_4277
Fe-S protein.
  
  
 
0.958
DB31_6393
Catalase.
   
 0.956
DB31_4160
Hydrolase, haloacid dehalogenase-like family protein.
    
 0.955
DB31_7005
Isocitrate lyase.
     
 0.955
DB31_3961
Phosphoglycolate phosphatase.
    
 0.949
DB31_7365
Phosphoglycolate phosphatase.
    
 0.949
DB31_0690
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.893
DB31_0774
D-amino-acid oxidase.
     
 0.893
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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