Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DB31_1457 | DB31_3208 | DB31_1457 | DB31_3208 | Adenosylhomocysteinase. | Two-component hybrid sensor and regulator. | 0.856 |
DB31_1457 | DB31_4658 | DB31_1457 | DB31_4658 | Adenosylhomocysteinase. | Two-component hybrid sensor and regulator. | 0.694 |
DB31_1457 | DB31_4702 | DB31_1457 | DB31_4702 | Adenosylhomocysteinase. | Two-component hybrid sensor and regulator. | 0.842 |
DB31_1457 | DB31_6362 | DB31_1457 | DB31_6362 | Adenosylhomocysteinase. | Sensory box histidine kinase/response regulator. | 0.850 |
DB31_1457 | DB31_6498 | DB31_1457 | DB31_6498 | Adenosylhomocysteinase. | Modular polyketide synthase; Belongs to the P-Pant transferase superfamily. | 0.821 |
DB31_1457 | birA | DB31_1457 | DB31_9094 | Adenosylhomocysteinase. | Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.701 |
DB31_1457 | nadE | DB31_1457 | DB31_3956 | Adenosylhomocysteinase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.776 |
DB31_1457 | nnrD | DB31_1457 | DB31_6425 | Adenosylhomocysteinase. | NAD(P)HX epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epime [...] | 0.839 |
DB31_1457 | purA-2 | DB31_1457 | DB31_3493 | Adenosylhomocysteinase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.719 |
DB31_1457 | ribB | DB31_1457 | DB31_8375 | Adenosylhomocysteinase. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.769 |
DB31_3208 | DB31_1457 | DB31_3208 | DB31_1457 | Two-component hybrid sensor and regulator. | Adenosylhomocysteinase. | 0.856 |
DB31_3208 | DB31_4658 | DB31_3208 | DB31_4658 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.999 |
DB31_3208 | DB31_4702 | DB31_3208 | DB31_4702 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.999 |
DB31_3208 | DB31_6362 | DB31_3208 | DB31_6362 | Two-component hybrid sensor and regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
DB31_3208 | DB31_6498 | DB31_3208 | DB31_6498 | Two-component hybrid sensor and regulator. | Modular polyketide synthase; Belongs to the P-Pant transferase superfamily. | 0.811 |
DB31_3208 | purA-2 | DB31_3208 | DB31_3493 | Two-component hybrid sensor and regulator. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.843 |
DB31_3208 | ribB | DB31_3208 | DB31_8375 | Two-component hybrid sensor and regulator. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.966 |
DB31_4658 | DB31_1457 | DB31_4658 | DB31_1457 | Two-component hybrid sensor and regulator. | Adenosylhomocysteinase. | 0.694 |
DB31_4658 | DB31_3208 | DB31_4658 | DB31_3208 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.999 |
DB31_4658 | DB31_4702 | DB31_4658 | DB31_4702 | Two-component hybrid sensor and regulator. | Two-component hybrid sensor and regulator. | 0.999 |
page 1 of 5