Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_1780Circadian clock protein KaiC. (528 aa)    
Predicted Functional Partners:
DB31_1779
Response regulator.
       0.785
DB31_1781
Hypothetical protein.
       0.714
DB31_7986
Phytochrome, two-component sensor histidine kinase.
 
 
 
 0.580
DB31_5822
Phytochrome, two-component sensor histidine kinase.
 
 
 
 0.521
DB31_2200
Hypothetical protein.
  
     0.515
DB31_5852
Phytochrome, two-component sensor histidine kinase.
 
 
 
 0.514
DB31_3518
Bacteriophytochrome heme oxygenase BphO.
 
     0.513
DB31_2960
PAS/PAC domain protein.
 
 
 
 0.503
DB31_5171
Hypothetical protein.
 
 
 
 0.496
DB31_3304
Phytochrome, two-component sensor histidine kinase.
   
 
 0.467
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.