Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_1992Hypothetical protein. (455 aa)    
Predicted Functional Partners:
DB31_1991
Thymidylate kinase.
       0.561
DB31_8328
Glycosyl transferase, group 2 family protein.
 
 0.509
DB31_0834
Glycosyl transferase, group 2 family protein.
  
 
 0.465
DB31_0835
Glycosyl transferase, group 2 family protein.
  
 
 0.465
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
  
 0.426
DB31_6403
Hypothetical protein.
  
     0.424
DB31_1593
Hypothetical protein.
 
  
 0.418
DB31_6097
Hypothetical protein.
  
     0.413
DB31_6764
Integral membrane protein; Belongs to the UbiA prenyltransferase family.
 
    0.411
DB31_1638
Hypothetical protein.
 
 
 0.409
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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