Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2139Alkaline phosphatase. (304 aa)    
Predicted Functional Partners:
DB31_7082
Hypothetical protein.
  
 
 0.758
DB31_9071
Hypothetical protein.
  
 
 0.746
DB31_6643
Hypothetical protein.
 
  
 0.672
purA-2
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.637
DB31_3174
Serine protease, subtilase family protein.
 
 0.629
DB31_6778
Hypothetical protein.
  
  
 0.616
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.610
DB31_9072
Internalin.
 
  0.572
DB31_0049
Flagellar motor switch protein FliM.
   
   0.549
DB31_2000
Flagellar hook-length control protein FliK.
   
  
 0.546
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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