Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2149Hypothetical protein. (477 aa)    
Predicted Functional Partners:
DB31_4702
Two-component hybrid sensor and regulator.
  
 0.964
DB31_7910
Hypothetical protein.
 
 0.926
DB31_3208
Two-component hybrid sensor and regulator.
   
 0.904
DB31_7970
Signal transduction histidine kinase.
  
 0.829
DB31_3959
Histidine kinase.
 
 
0.814
DB31_4272
Response regulator.
  
  0.807
DB31_0878
Serine phosphatase RsbU, regulator of sigma subunit protein.
  
  0.801
DB31_4094
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor component CheY.
  
  0.797
DB31_7587
Sensor histidine kinase/response regulator.
 
 
0.796
DB31_1779
Response regulator.
  
  0.794
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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