Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DB31_2199Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (350 aa)    
Predicted Functional Partners:
DB31_0112
Long-chain-fatty-acid--CoA ligase.
     
 0.854
DB31_6459
Long-chain-fatty-acid--CoA ligase.
     
 0.849
DB31_0222
Long-chain-fatty-acid--CoA ligase.
    
 0.714
DB31_0096
Malonyl CoA-acyl carrier protein transacylase.
    
 0.655
DB31_2198
Aspartokinase; Belongs to the aspartokinase family.
       0.563
DB31_0838
Long-chain-fatty-acid--CoA ligase.
     
 0.545
DB31_7947
Hypothetical protein.
   
 0.518
DB31_6458
Long-chain-fatty-acid--CoA ligase.
     
 0.514
DB31_2200
Hypothetical protein.
 
    0.513
DB31_3507
Hypothetical protein.
 
   
 0.457
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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