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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DB31_2199Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (350 aa)    
Predicted Functional Partners:
DB31_0096
Malonyl CoA-acyl carrier protein transacylase.
    
 0.927
DB31_0112
Long-chain-fatty-acid--CoA ligase.
     
 0.886
DB31_6459
Long-chain-fatty-acid--CoA ligase.
     
 0.880
DB31_0222
Long-chain-fatty-acid--CoA ligase.
    
 0.835
DB31_0838
Long-chain-fatty-acid--CoA ligase.
     
 0.829
DB31_6483
Long-chain-fatty-acid--CoA ligase.
    
 0.772
DB31_6481
Phenolpthiocerol synthesis type-I polyketide synthase PPSD.
    
 0.734
DB31_6458
Long-chain-fatty-acid--CoA ligase.
     
 0.579
DB31_2198
Aspartokinase; Belongs to the aspartokinase family.
       0.563
DB31_4821
Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.542
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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