Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DB31_2255Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. (558 aa)    
Predicted Functional Partners:
DB31_2256
Cytochrome c oxidase polypeptide III.
 
 0.998
DB31_2254
Cytochrome c oxidase polypeptide II.
 
 0.996
DB31_7885
Cytochrome c oxidase polypeptide II.
 
 0.992
DB31_3570
Menaquinone-cytochrome c reductase, cytochrome B subunit protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.991
ctaB
Heme O synthase, protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.989
DB31_1796
Cytochrome c oxidase polypeptide III.
 
 0.988
DB31_1794
Cytochrome c oxidase polypeptide II.
 
 0.980
DB31_2253
SCO1/SenC family protein.
 
 
 0.959
DB31_2257
Cytochrome c oxidase polypeptide IV.
 
  
  0.952
DB31_2246
Molybdopterin oxidoreductase subunit protein.
 
 0.946
Your Current Organism:
Hyalangium minutum
NCBI taxonomy Id: 394096
Other names: CIP 109157, DSM 14724, H. minutum, Hyalangium minutum Reichenbach 2007, JCM 12630, strain NOCB-2
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